Hello @matbac,
You can generate the orthomosaic with each pixel with the temperature value using the Zenmuse XT2 camera. For more information, visit Processing thermal images.
You can’t export the pixel temperature as a .csv file using Pix4Dmapper, however, you should be able to export those values using Matlab or any GIS software.
Regarding your new Zenmuse H20T camera, I would suggest you to go through the below post,
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